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- rs562855890[chr19:3554453]
Enhancers that have rs562855890[chr19:3554453]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
3550863 |
3556635 |
enh4966 |
|
|
Transcript factors that have rs562855890[chr19:3554453]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
3553960
|
3555276
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108367821
|
|
|
chr19
|
3554038
|
3559185
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
21839629
|
|
|
chr19
|
3554038
|
3559185
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108367822
|
|
|
chr19
|
3554051
|
3555406
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108367823
|
|
|
chr19
|
3554123
|
3555228
|
STAT3
|
GTRD
|
no
|
Blood (OCI-LY7)
|
21839630
|
|
|
chr19
|
3554123
|
3555228
|
STAT3
|
GTRD
|
no
|
Blood (OCI-LY7)
|
108367824
|
|
|
chr19
|
3554192
|
3555364
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108367825
|
|
|
chr19
|
3554434
|
3554454
|
RREB1
|
JASPAR
|
yes
|
|
112138920
|
|
|
chr19
|
3554436
|
3554456
|
RREB1
|
JASPAR
|
yes
|
|
112138921
|
|
|
chr19
|
3554438
|
3554459
|
IRF1
|
JASPAR
|
yes
|
|
112138923
|
|
|
chr19
|
3554439
|
3554459
|
RREB1
|
JASPAR
|
yes
|
|
112138924
|
|
|
chr19
|
3554442
|
3554457
|
FOXP1
|
JASPAR
|
yes
|
|
112138925
|
|
|
chr19
|
3554443
|
3554464
|
IRF1
|
JASPAR
|
yes
|
|
112138926
|
|
|
chr19
|
3554444
|
3554459
|
FOXP1
|
JASPAR
|
yes
|
|
112138927
|
|
|
chr19
|
3554444
|
3554464
|
RREB1
|
JASPAR
|
yes
|
|
112138928
|
|
|
chr19
|
3554444
|
3554465
|
IRF1
|
JASPAR
|
yes
|
|
112138929
|
|
|
chr19
|
3554445
|
3554460
|
FOXP1
|
JASPAR
|
yes
|
|
112138930
|
|
|
chr19
|
3554446
|
3554461
|
FOXP1
|
JASPAR
|
yes
|
|
112138931
|
|
|
chr19
|
3554447
|
3554462
|
FOXP1
|
JASPAR
|
yes
|
|
112138932
|
|
|
chr19
|
3554447
|
3554468
|
IRF1
|
JASPAR
|
yes
|
|
112138933
|
|
|
chr19
|
3554448
|
3554463
|
FOXP1
|
JASPAR
|
yes
|
|
112138934
|
|
|
chr19
|
3554448
|
3554469
|
IRF1
|
JASPAR
|
yes
|
|
112138935
|
|
|
chr19
|
3554449
|
3554464
|
FOXP1
|
JASPAR
|
yes
|
|
112138936
|
|
|
chr19
|
3554449
|
3554470
|
IRF1
|
JASPAR
|
yes
|
|
112138937
|
|
|
chr19
|
3554450
|
3554465
|
FOXP1
|
JASPAR
|
yes
|
|
112138938
|
|
|
chr19
|
3554452
|
3554467
|
FOXP1
|
JASPAR
|
yes
|
|
112138939
|
|
|
chr19
|
3554453
|
3554474
|
IRF1
|
JASPAR
|
yes
|
|
112138940
|
|
Genes associated with rs562855890[chr19:3554453], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |