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- rs562955[chr15:58622550]
Enhancers that have rs562955[chr15:58622550]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr15 |
58621992 |
58622651 |
vista20111 |
|
|
Transcript factors that have rs562955[chr15:58622550]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr15
|
58622148
|
58622644
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
108140854
|
|
|
chr15
|
58622167
|
58622637
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
108140855
|
|
|
chr15
|
58622167
|
58622841
|
GATA3
|
UCSC Txn Factor
|
no
|
Conserved
|
108140856
|
|
|
chr15
|
58622196
|
58622766
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
108140857
|
|
|
chr15
|
58622197
|
58622597
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108140858
|
|
|
chr15
|
58622283
|
58622799
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108140859
|
|
|
chr15
|
58622298
|
58622578
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108140860
|
|
|
chr15
|
58622324
|
58622614
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108140861
|
|
|
chr15
|
58622371
|
58622841
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
108140862
|
|
|
chr15
|
58622536
|
58622550
|
TLX1
|
JASPAR
|
yes
|
|
70530698
|
|
Genes associated with rs562955[chr15:58622550], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |