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- rs563234200[chr16:88862894]
Enhancers that have rs563234200[chr16:88862894]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
88855160 |
88863461 |
enh47985 |
|
|
Transcript factors that have rs563234200[chr16:88862894]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
88862760
|
88868213
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108224048
|
|
|
chr16
|
88862760
|
88868213
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108224049
|
|
|
chr16
|
88862776
|
88868270
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108224050
|
|
|
chr16
|
88862776
|
88868270
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108224051
|
|
|
chr16
|
88862786
|
88866225
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108224052
|
|
|
chr16
|
88862876
|
88862897
|
REST
|
JASPAR
|
yes
|
|
12304916
|
|
|
chr16
|
88862877
|
88862896
|
REST
|
JASPAR
|
yes
|
|
12304917
|
|
|
chr16
|
88862893
|
88862905
|
PKNOX1
|
JASPAR
|
yes
|
|
12304918
|
|
|
chr16
|
88862893
|
88862905
|
PKNOX2
|
JASPAR
|
yes
|
|
12304919
|
|
|
chr16
|
88862893
|
88862905
|
TGIF1
|
JASPAR
|
yes
|
|
12304920
|
|
|
chr16
|
88862893
|
88862905
|
TGIF2
|
JASPAR
|
yes
|
|
12304921
|
|
|
chr16
|
88862894
|
88862904
|
MSC
|
JASPAR
|
yes
|
|
12304922
|
|
|
chr16
|
88862894
|
88862904
|
MYF6
|
JASPAR
|
yes
|
|
12304923
|
|
Genes associated with rs563234200[chr16:88862894], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |