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- rs563299546[chr16:1175067]
Enhancers that have rs563299546[chr16:1175067]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
1171945 |
1177784 |
enh52190 |
|
|
Transcript factors that have rs563299546[chr16:1175067]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
1171353
|
1175840
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684242
|
|
|
chr16
|
1171353
|
1175840
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108171163
|
|
|
chr16
|
1173484
|
1176447
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108171164
|
|
|
chr16
|
1173862
|
1175652
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684248
|
|
|
chr16
|
1173862
|
1175652
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108171165
|
|
|
chr16
|
1173865
|
1176188
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684249
|
|
|
chr16
|
1173865
|
1176188
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108171166
|
|
|
chr16
|
1173873
|
1177476
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684250
|
|
|
chr16
|
1173873
|
1177476
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108171167
|
|
|
chr16
|
1173920
|
1176760
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684251
|
|
|
chr16
|
1173920
|
1176760
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108171168
|
|
|
chr16
|
1173930
|
1176526
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108171169
|
|
|
chr16
|
1174108
|
1175585
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684252
|
|
|
chr16
|
1174448
|
1175212
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684254
|
|
|
chr16
|
1174483
|
1175572
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684255
|
|
|
chr16
|
1174587
|
1175083
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684257
|
|
|
chr16
|
1174690
|
1175318
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684258
|
|
|
chr16
|
1174700
|
1175241
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684259
|
|
|
chr16
|
1174757
|
1175076
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684260
|
|
|
chr16
|
1174956
|
1176501
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108171170
|
|
|
chr16
|
1175056
|
1175067
|
NFKB1
|
JASPAR
|
yes
|
|
9137542
|
|
|
chr16
|
1175057
|
1175067
|
NFKB1
|
JASPAR
|
yes
|
|
9137543
|
|
|
chr16
|
1175059
|
1175073
|
GLIS2
|
JASPAR
|
yes
|
|
9137544
|
|
|
chr16
|
1175059
|
1175073
|
GLIS3
|
JASPAR
|
yes
|
|
9137545
|
|
Genes associated with rs563299546[chr16:1175067], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |