EnhancerDB
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  3. rs56345328[chr1:236105535]
Enhancers that have rs56345328[chr1:236105535]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 236091945 236120510 enh12806
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Placenta Muscle (Myoblast) Breast Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Stomach
chr1 236105368 236105579 vista5731
VISTA
Transcript factors that have rs56345328[chr1:236105535]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 236104756 236106081 ZNF274 GTRD no Bone Marrow (K562) 107886369
chr1 236105109 236105712 ZNF274 GTRD no Bone Marrow (K562) 107886372
chr1 236105187 236105675 ZNF143 GTRD no Epithelial (MCF-7) 107886373
chr1 236105199 236105855 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107886374
chr1 236105205 236105574 ZNF143 GTRD no Epithelial (MCF-7) 107886375
chr1 236105530 236105539 TFAP2A JASPAR yes 36390953
chr1 236105530 236105539 TFAP2A JASPAR yes 118490067
Genes associated with rs56345328[chr1:236105535], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More