EnhancerDB
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  3. rs56383911[chr1:2068714]
Enhancers that have rs56383911[chr1:2068714]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2056625 2074371 enh11419
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Thyroid Lung (PC-9) Thymus Epithelial (MCF-7)
chr1 2068660 2068858 vista57
VISTA
Transcript factors that have rs56383911[chr1:2068714]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2067890 2069905 TCF7L2 GTRD no Colon (HCT116) 107801807
chr1 2068701 2068722 ZNF263 JASPAR yes 26219037
chr1 2068701 2068722 ZNF263 JASPAR yes 118215809
chr1 2068705 2068716 ELK4 JASPAR yes 26219039
chr1 2068705 2068716 FLI1 JASPAR yes 26219040
chr1 2068705 2068716 ELK4 JASPAR yes 118215811
chr1 2068705 2068716 FLI1 JASPAR yes 118215812
chr1 2068705 2068718 ELF3 JASPAR yes 26219041
chr1 2068705 2068718 ELF3 JASPAR yes 118215813
chr1 2068706 2068716 ETV6 JASPAR yes 26219042
chr1 2068706 2068716 ETV6 JASPAR yes 118215814
chr1 2068706 2068717 ELF5 JASPAR yes 26219043
chr1 2068706 2068717 ELF5 JASPAR yes 118215815
chr1 2068706 2068718 EHF JASPAR yes 26219044
chr1 2068706 2068718 EHF JASPAR yes 118215816
chr1 2068708 2068714 ETS1 JASPAR yes 26219045
chr1 2068708 2068714 SPI1 JASPAR yes 26219046
chr1 2068708 2068714 ETS1 JASPAR yes 118215817
chr1 2068708 2068714 SPI1 JASPAR yes 118215818
Genes associated with rs56383911[chr1:2068714], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 2439972 2458039 - PANK4 ENSG00000157881.9 2458039 371258 Thyroid 0.208722 67