EnhancerDB
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  3. rs56392124[chr19:2463554]
Enhancers that have rs56392124[chr19:2463554]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2462417 2466543 enh86294
Colon (HCT116)
Transcript factors that have rs56392124[chr19:2463554]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2461022 2463670 TCF7L2 GTRD no Colon (HCT116) 21835452
chr19 2461416 2463581 TCF7L2 GTRD no Colon (HCT116) 21835455
chr19 2461451 2463614 TCF7L2 GTRD no Colon (HCT116) 21835456
chr19 2461460 2463707 TCF7L2 GTRD no Colon (HCT116) 21835457
chr19 2461558 2463573 TCF7L2 GTRD no Colon (HCT116) 21835459
chr19 2461674 2463563 TCF7L2 GTRD no Colon (HCT116) 21835460
chr19 2462357 2465166 TCF7L2 GTRD no Colon (HCT116) 21835465
chr19 2462412 2465064 TCF7L2 GTRD no Colon (HCT116) 21835466
chr19 2463413 2463995 TCF7L2 GTRD no Colon (HCT116) 21835473
chr19 2463542 2463555 SMAD2 JASPAR yes 112064189
chr19 2463547 2463559 PKNOX1 JASPAR yes 112064190
chr19 2463547 2463559 PKNOX2 JASPAR yes 112064191
chr19 2463547 2463559 TGIF2 JASPAR yes 112064192
chr19 2463548 2463558 NHLH1 JASPAR yes 112064193
Genes associated with rs56392124[chr19:2463554], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More