EnhancerDB
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  3. rs563978499[chr1:178828965]
Enhancers that have rs563978499[chr1:178828965]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178825085 178829235 enh111533
Brain (SK-N-MC)
Transcript factors that have rs563978499[chr1:178828965]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178828952 178828972 RREB1 JASPAR yes 33451367
chr1 178828953 178828968 NR2C2 JASPAR yes 33451368
chr1 178828953 178828973 RREB1 JASPAR yes 33451369
chr1 178828954 178828974 RREB1 JASPAR yes 33451371
chr1 178828955 178828965 SP1 JASPAR yes 33451372
chr1 178828955 178828965 ZNF740 JASPAR yes 33451373
chr1 178828955 178828975 RREB1 JASPAR yes 33451374
chr1 178828956 178828966 SP1 JASPAR yes 33451375
chr1 178828956 178828966 ZNF740 JASPAR yes 33451376
chr1 178828956 178828976 RREB1 JASPAR yes 33451377
chr1 178828957 178828967 SP1 JASPAR yes 33451378
chr1 178828957 178828967 ZNF740 JASPAR yes 33451379
chr1 178828958 178828968 SP1 JASPAR yes 33451380
chr1 178828958 178828968 ZNF740 JASPAR yes 33451381
chr1 178828959 178828969 SP1 JASPAR yes 33451382
chr1 178828959 178828969 ZNF740 JASPAR yes 33451383
chr1 178828959 178828979 RREB1 JASPAR yes 33451384
chr1 178828960 178828970 ZNF740 JASPAR yes 33451385
chr1 178828961 178828971 ZNF740 JASPAR yes 33451386
chr1 178828963 178828983 RREB1 JASPAR yes 33451387
Genes associated with rs563978499[chr1:178828965], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More