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- rs564038779[chr17:79979038]
Enhancers that have rs564038779[chr17:79979038]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
79975885 |
79980035 |
enh4644 |
|
|
Transcript factors that have rs564038779[chr17:79979038]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
79978583
|
79981908
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108310707
|
|
|
chr17
|
79978924
|
79979540
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108310708
|
|
|
chr17
|
79978938
|
79979402
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108310709
|
|
|
chr17
|
79978946
|
79979330
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108310710
|
|
|
chr17
|
79978948
|
79979344
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108310711
|
|
|
chr17
|
79978953
|
79979538
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108310712
|
|
|
chr17
|
79978965
|
79980201
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108310713
|
|
|
chr17
|
79978973
|
79979343
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108310714
|
|
|
chr17
|
79978974
|
79979430
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108310715
|
|
|
chr17
|
79978982
|
79979406
|
CTCF
|
UCSC Txn Factor
|
no
|
Conserved
|
108310716
|
|
|
chr17
|
79978983
|
79979584
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108310717
|
|
|
chr17
|
79978985
|
79979335
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108310718
|
|
|
chr17
|
79978987
|
79979506
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108310719
|
|
|
chr17
|
79978991
|
79979391
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108310720
|
|
|
chr17
|
79979001
|
79980236
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108310721
|
|
|
chr17
|
79979003
|
79979343
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108310722
|
|
|
chr17
|
79979007
|
79979383
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108310723
|
|
|
chr17
|
79979007
|
79980125
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108310724
|
|
|
chr17
|
79979009
|
79979369
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108310725
|
|
|
chr17
|
79979010
|
79979330
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108310726
|
|
|
chr17
|
79979010
|
79979380
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108310727
|
|
|
chr17
|
79979016
|
79979372
|
TAF1
|
ENCODE Uniform TFBS
|
no
|
Brain (SK-N-SH)
|
108310728
|
|
|
chr17
|
79979020
|
79979583
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108310729
|
|
|
chr17
|
79979021
|
79979337
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108310730
|
|
|
chr17
|
79979026
|
79979043
|
RXRA
|
JASPAR
|
yes
|
|
56347398
|
|
|
chr17
|
79979027
|
79980004
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108310731
|
|
|
chr17
|
79979037
|
79979640
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108310732
|
|
|
chr17
|
79979038
|
79979882
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108310733
|
|
|
chr17
|
79979038
|
79979961
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108310734
|
|
Genes associated with rs564038779[chr17:79979038], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |