EnhancerDB
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  3. rs564589077[chr19:2462698]
Enhancers that have rs564589077[chr19:2462698]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2462417 2466543 enh86294
Colon (HCT116)
Transcript factors that have rs564589077[chr19:2462698]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2461022 2463670 TCF7L2 GTRD no Colon (HCT116) 21835452
chr19 2461416 2463581 TCF7L2 GTRD no Colon (HCT116) 21835455
chr19 2461451 2463614 TCF7L2 GTRD no Colon (HCT116) 21835456
chr19 2461460 2463707 TCF7L2 GTRD no Colon (HCT116) 21835457
chr19 2461480 2463534 TCF7L2 GTRD no Colon (HCT116) 21835458
chr19 2461558 2463573 TCF7L2 GTRD no Colon (HCT116) 21835459
chr19 2461674 2463563 TCF7L2 GTRD no Colon (HCT116) 21835460
chr19 2461750 2462814 TCF7L2 GTRD no Colon (HCT116) 21835462
chr19 2462357 2465166 TCF7L2 GTRD no Colon (HCT116) 21835465
chr19 2462412 2465064 TCF7L2 GTRD no Colon (HCT116) 21835466
chr19 2462604 2463466 TCF7L2 GTRD no Colon (HCT116) 21835467
chr19 2462691 2462700 NKX3-2 JASPAR yes 112064103
chr19 2462691 2462701 NKX2-3 JASPAR yes 112064104
chr19 2462692 2462700 ISL2 JASPAR yes 112064105
chr19 2462692 2462701 NKX2-8 JASPAR yes 112064106
chr19 2462695 2462710 FOXP1 JASPAR yes 112064107
chr19 2462696 2462711 FOXP1 JASPAR yes 112064108
chr19 2462697 2462703 TBP TRANSFAC yes 112064109
chr19 2462697 2462712 FOXP1 JASPAR yes 112064110
chr19 2462697 2462718 IRF1 JASPAR yes 112064111
chr19 2462698 2462713 FOXP1 JASPAR yes 112064112
chr19 2462698 2462719 IRF1 JASPAR yes 112064113
Genes associated with rs564589077[chr19:2462698], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More