EnhancerDB
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  3. rs565366079[chr6:108884198]
Enhancers that have rs565366079[chr6:108884198]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 108877863 108893955 enh9307
Liver (HepG2) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Thymus Heart
chr6 108883670 108884545 vista53040
VISTA
Transcript factors that have rs565366079[chr6:108884198]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 108883454 108884410 POLR2A UCSC Txn Factor no Conserved 108541221
chr6 108883770 108884243 MYC UCSC Txn Factor no Conserved 108541223
chr6 108883817 108884290 GATA1 UCSC Txn Factor no Conserved 108541225
chr6 108884191 108884212 IRF1 JASPAR yes 70413657
chr6 108884191 108884212 IRF1 JASPAR yes 104177541
chr6 108884196 108884216 RREB1 JASPAR yes 70413658
chr6 108884196 108884216 RREB1 JASPAR yes 104177542
chr6 108884196 108884217 IRF1 JASPAR yes 70413659
chr6 108884196 108884217 IRF1 JASPAR yes 104177543
chr6 108884198 108884213 FOXP1 JASPAR yes 70413660
chr6 108884198 108884213 FOXP1 JASPAR yes 104177544
Genes associated with rs565366079[chr6:108884198], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More