EnhancerDB
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  3. rs566052869[chr1:116829420]
Enhancers that have rs566052869[chr1:116829420]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116827040 116837335 enh579
Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Blood (GM12878) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs566052869[chr1:116829420]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116829176 116829440 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21331849
chr1 116829412 116829421 PITX3 JASPAR yes 31789670
chr1 116829412 116829422 GSC2 JASPAR yes 31789671
chr1 116829412 116829422 GSC JASPAR yes 31789672
chr1 116829413 116829421 OTX1 JASPAR yes 31789673
chr1 116829413 116829421 OTX2 JASPAR yes 31789674
Genes associated with rs566052869[chr1:116829420], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More