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- rs566269483[chr19:3551449]
Enhancers that have rs566269483[chr19:3551449]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
3550863 |
3556635 |
enh4966 |
|
|
Transcript factors that have rs566269483[chr19:3551449]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
3550687
|
3551828
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108367695
|
|
|
chr19
|
3550693
|
3552021
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108367696
|
|
|
chr19
|
3550734
|
3552275
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108367697
|
|
|
chr19
|
3550801
|
3552496
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108367698
|
|
|
chr19
|
3551091
|
3552244
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108367699
|
|
|
chr19
|
3551201
|
3551677
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108367700
|
|
|
chr19
|
3551406
|
3552127
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108367701
|
|
|
chr19
|
3551436
|
3551449
|
NFKB1
|
JASPAR
|
yes
|
|
112138410
|
|
|
chr19
|
3551436
|
3551449
|
NFKB2
|
JASPAR
|
yes
|
|
112138411
|
|
|
chr19
|
3551440
|
3551459
|
RFX2
|
JASPAR
|
yes
|
|
112138414
|
|
|
chr19
|
3551447
|
3551453
|
ETS1
|
JASPAR
|
yes
|
|
112138415
|
|
Genes associated with rs566269483[chr19:3551449], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |