EnhancerDB
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Enhancers that have rs566438590[chr17:77720049]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 77717094 77728315 enh52598
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Esophagus Colon (HCT116) Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs566438590[chr17:77720049]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 77719916 77720320 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21795666
chr17 77719949 77720225 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21795667
chr17 77719965 77720335 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21795668
chr17 77719986 77720256 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21795669
chr17 77720000 77720276 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21795670
chr17 77720001 77720291 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21795671
chr17 77720003 77720263 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21795672
chr17 77720007 77720287 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21795673
chr17 77720030 77720222 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21795674
chr17 77720031 77720052 IRF1 JASPAR yes 56216708
chr17 77720036 77720057 IRF1 JASPAR yes 56216710
chr17 77720037 77720052 FOXP1 JASPAR yes 56216711
chr17 77720037 77720058 IRF1 JASPAR yes 56216712
chr17 77720037 77720221 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21795675
chr17 77720041 77720056 STAT2 JASPAR yes 56216713
chr17 77720041 77720213 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21795676
chr17 77720042 77720057 FOXP1 JASPAR yes 56216714
chr17 77720042 77720063 IRF1 JASPAR yes 56216715
chr17 77720045 77720218 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21795677
chr17 77720046 77720061 STAT2 JASPAR yes 56216716
chr17 77720047 77720062 FOXP1 JASPAR yes 56216717
chr17 77720047 77720068 IRF1 JASPAR yes 56216718
Genes associated with rs566438590[chr17:77720049], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More