EnhancerDB
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  3. rs566580005[chr19:2464279]
Enhancers that have rs566580005[chr19:2464279]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2462417 2466543 enh86294
Colon (HCT116)
Transcript factors that have rs566580005[chr19:2464279]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2462357 2465166 TCF7L2 GTRD no Colon (HCT116) 21835465
chr19 2462412 2465064 TCF7L2 GTRD no Colon (HCT116) 21835466
chr19 2464265 2464279 ONECUT2 JASPAR yes 112064356
chr19 2464265 2464279 ONECUT3 JASPAR yes 112064357
chr19 2464265 2464280 FOXP1 JASPAR yes 112064358
chr19 2464265 2464280 HNF1A JASPAR yes 112064359
chr19 2464266 2464280 POU4F1 JASPAR yes 112064360
chr19 2464266 2464281 FOXA1 JASPAR yes 112064361
chr19 2464266 2464282 POU4F2 JASPAR yes 112064362
chr19 2464266 2464282 POU4F3 JASPAR yes 112064363
chr19 2464267 2464279 FOXC2 JASPAR yes 112064367
chr19 2464268 2464280 FOXI1 JASPAR yes 112064368
chr19 2464269 2464283 ONECUT3 JASPAR yes 112064369
chr19 2464269 2464284 HNF1A JASPAR yes 112064370
chr19 2464270 2464284 POU4F1 JASPAR yes 112064371
chr19 2464270 2464285 FOXA1 JASPAR yes 112064372
chr19 2464270 2464286 POU4F2 JASPAR yes 112064373
chr19 2464271 2464282 FOXB1 JASPAR yes 112064374
chr19 2464271 2464282 FOXC1 JASPAR yes 112064375
chr19 2464271 2464282 PROP1 JASPAR yes 112064376
chr19 2464271 2464283 FOXC2 JASPAR yes 112064377
chr19 2464272 2464284 FOXI1 JASPAR yes 112064378
Genes associated with rs566580005[chr19:2464279], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More