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- rs566879281[chr12:52889354]
Enhancers that have rs566879281[chr12:52889354]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
52889322 |
52889458 |
vista13478 |
|
|
Transcript factors that have rs566879281[chr12:52889354]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
52888799
|
52889580
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108034009
|
|
|
chr12
|
52888841
|
52889846
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108034010
|
|
|
chr12
|
52889216
|
52889522
|
CTCF
|
UCSC Txn Factor
|
no
|
Conserved
|
108034011
|
|
|
chr12
|
52889264
|
52889454
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
108034012
|
|
|
chr12
|
52889341
|
52889355
|
ZIC1
|
JASPAR
|
yes
|
|
82407314
|
|
|
chr12
|
52889347
|
52889360
|
SMAD2
|
JASPAR
|
yes
|
|
82407315
|
|
|
chr12
|
52889350
|
52889354
|
LFA1
|
TRANSFAC
|
yes
|
|
82407316
|
|
Genes associated with rs566879281[chr12:52889354], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |