EnhancerDB
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  3. rs568004497[chr6:36625576]
Enhancers that have rs568004497[chr6:36625576]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 36614945 36639164 enh9086
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs568004497[chr6:36625576]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 36625574 36625589 SCRT1 JASPAR yes 101355350
chr6 36625575 36625585 ID4 JASPAR yes 101355351
chr6 36625575 36625585 TCF3 JASPAR yes 101355352
chr6 36625575 36625585 TCF4 JASPAR yes 101355353
chr6 36625576 36625585 SNAI2 JASPAR yes 101355354
Genes associated with rs568004497[chr6:36625576], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More