EnhancerDB
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  3. rs568652[chr15:40389870]
Enhancers that have rs568652[chr15:40389870]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40386275 40399315 enh3538
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs568652[chr15:40389870]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40389358 40390782 AR GTRD no Prostate (PC-3) 21650198
chr15 40389358 40390782 AR GTRD no Prostate (PC-3) 108133951
chr15 40389783 40390263 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21650199
chr15 40389783 40390263 ZNF263 UCSC Txn Factor no Conserved 108133952
chr15 40389783 40390263 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108133953
chr15 40389869 40389888 RFX2 JASPAR yes 22929187
Genes associated with rs568652[chr15:40389870], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More