EnhancerDB
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  3. rs56888636[chr15:40393612]
Enhancers that have rs56888636[chr15:40393612]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40386275 40399315 enh3538
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr15 40393486 40393659 vista19725
VISTA
Transcript factors that have rs56888636[chr15:40393612]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40392693 40393832 AR GTRD no Prostate (PC-3) 21650324
chr15 40392693 40393832 AR GTRD no Prostate (PC-3) 108134104
chr15 40393268 40393864 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21650325
chr15 40393268 40393864 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108134105
chr15 40393366 40393686 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21650326
chr15 40393366 40393686 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108134106
chr15 40393409 40393779 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21650327
chr15 40393409 40393779 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108134107
chr15 40393420 40393896 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21650328
chr15 40393420 40393896 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108134108
chr15 40393433 40393817 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21650329
chr15 40393433 40393817 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108134109
chr15 40393450 40393780 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21650330
chr15 40393450 40393780 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108134110
chr15 40393457 40394040 ZNF274 GTRD no Liver (HepG2) 21650331
chr15 40393457 40394040 ZNF274 GTRD no Liver (HepG2) 108134111
chr15 40393476 40393981 ZNF274 GTRD no Liver (HepG2) 21650332
chr15 40393476 40393981 ZNF274 GTRD no Liver (HepG2) 108134112
chr15 40393506 40393770 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21650333
chr15 40393506 40393770 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108134113
chr15 40393517 40393670 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21650334
chr15 40393517 40393670 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108134114
chr15 40393519 40394004 ZNF274 GTRD no Liver (HepG2) 21650335
chr15 40393519 40394004 ZNF274 GTRD no Liver (HepG2) 108134115
chr15 40393604 40393619 STAT1 JASPAR yes 22929674
chr15 40393604 40393619 STAT1 JASPAR yes 70511808
chr15 40393605 40393612 SPI1 JASPAR yes 22929675
chr15 40393605 40393612 SPI1 JASPAR yes 70511809
chr15 40393605 40393613 EHF JASPAR yes 22929676
chr15 40393605 40393613 FEV JASPAR yes 22929677
chr15 40393605 40393613 EHF JASPAR yes 70511810
chr15 40393605 40393613 FEV JASPAR yes 70511811
chr15 40393606 40393617 STAT3 JASPAR yes 22929678
chr15 40393606 40393617 STAT3 JASPAR yes 70511812
chr15 40393609 40393928 ZNF274 GTRD no Bone Marrow (K562) 21650336
chr15 40393609 40393928 ZNF274 GTRD no Bone Marrow (K562) 108134116
Genes associated with rs56888636[chr15:40393612], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More