EnhancerDB
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  3. rs56928079[chr10:25182508]
Enhancers that have rs56928079[chr10:25182508]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 25169345 25193458 enh13071
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs56928079[chr10:25182508]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 25182507 25182522 ZIC3 JASPAR yes 126101959
chr10 25182507 25182522 ZIC4 JASPAR yes 126101960
chr10 25182508 25182522 ZIC1 JASPAR yes 126101961
Genes associated with rs56928079[chr10:25182508], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr10 25137536 25241533 - PRTFDC1 ENSG00000099256.14 25241533 0 Heart 0.193224 9688