EnhancerDB
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  3. rs569574925[chr1:55778341]
Enhancers that have rs569574925[chr1:55778341]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55772775 55779376 enh26719
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube)
Transcript factors that have rs569574925[chr1:55778341]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55778332 55778342 GSC2 JASPAR yes 29027453
chr1 55778332 55778342 GSC JASPAR yes 29027454
chr1 55778333 55778341 OTX1 JASPAR yes 29027455
chr1 55778333 55778342 PITX3 JASPAR yes 29027456
chr1 55778338 55778348 GSC2 JASPAR yes 29027457
chr1 55778339 55778347 OTX2 JASPAR yes 29027458
chr1 55778339 55778348 PITX3 JASPAR yes 29027459
Genes associated with rs569574925[chr1:55778341], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More