EnhancerDB
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  3. rs570518957[chr1:28854065]
Enhancers that have rs570518957[chr1:28854065]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28831005 28856175 enh187
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Epithelial (MCF-7)
Transcript factors that have rs570518957[chr1:28854065]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28854055 28854069 ONECUT1 JASPAR yes 27776214
chr1 28854055 28854069 ONECUT2 JASPAR yes 27776215
chr1 28854055 28854069 ONECUT3 JASPAR yes 27776216
chr1 28854056 28854069 DUXA JASPAR yes 27776217
chr1 28854057 28854068 DUX4 JASPAR yes 27776218
chr1 28854058 28854068 PAX3 JASPAR yes 27776219
chr1 28854058 28854068 PAX7 JASPAR yes 27776220
chr1 28854058 28854070 PBX1 JASPAR yes 27776221
chr1 28854059 28854073 ONECUT1 JASPAR yes 27776222
chr1 28854059 28854073 ONECUT2 JASPAR yes 27776223
chr1 28854059 28854073 ONECUT3 JASPAR yes 27776224
chr1 28854062 28854072 PAX3 JASPAR yes 27776225
chr1 28854062 28854072 PAX7 JASPAR yes 27776226
chr1 28854064 28854074 GSX2 JASPAR yes 27776227
chr1 28854064 28854074 LBX2 JASPAR yes 27776228
chr1 28854064 28854074 MIXL1 JASPAR yes 27776229
chr1 28854064 28854074 MNX1 JASPAR yes 27776230
chr1 28854064 28854074 RAX JASPAR yes 27776231
chr1 28854065 28854073 ISX JASPAR yes 27776232
chr1 28854065 28854073 LHX9 JASPAR yes 27776233
chr1 28854065 28854073 LMX1B JASPAR yes 27776234
chr1 28854065 28854073 PRRX1 JASPAR yes 27776235
chr1 28854065 28854073 RAX2 JASPAR yes 27776236
chr1 28854065 28854073 SHOX JASPAR yes 27776237
chr1 28854065 28854073 UNCX JASPAR yes 27776238
Genes associated with rs570518957[chr1:28854065], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More