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- rs571927420[chr17:29609193]
Enhancers that have rs571927420[chr17:29609193]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
29609076 |
29609437 |
vista24389 |
|
|
Transcript factors that have rs571927420[chr17:29609193]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
29608596
|
29609607
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108249287
|
|
|
chr17
|
29608740
|
29609651
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108249289
|
|
|
chr17
|
29608751
|
29609224
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108249290
|
|
|
chr17
|
29608814
|
29609195
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108249292
|
|
|
chr17
|
29608818
|
29609492
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108249293
|
|
|
chr17
|
29609180
|
29609193
|
NR2F1
|
JASPAR
|
yes
|
|
21218031
|
|
Genes associated with rs571927420[chr17:29609193], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |