EnhancerDB
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  3. rs572337953[chr19:3555845]
Enhancers that have rs572337953[chr19:3555845]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3550863 3556635 enh4966
Blood (OCI-LY7) Blood (T-cell) Thymus Blood (Karpas-422)
Transcript factors that have rs572337953[chr19:3555845]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3554038 3559185 ZNF274 GTRD no Cervix (HeLa-S3) 21839629
chr19 3554038 3559185 ZNF274 GTRD no Cervix (HeLa-S3) 108367822
chr19 3554768 3558480 TCF7L2 GTRD no Colon (HCT116) 21839631
chr19 3554768 3558480 TCF7L2 GTRD no Colon (HCT116) 108367826
chr19 3555225 3558696 ZNF274 GTRD no Cervix (HeLa-S3) 21839632
chr19 3555225 3558696 ZNF274 GTRD no Cervix (HeLa-S3) 108367827
chr19 3555248 3556049 ZNF274 GTRD no Cervix (HeLa-S3) 108367828
chr19 3555301 3556455 ZNF274 GTRD no Cervix (HeLa-S3) 108367829
chr19 3555316 3558525 TCF7L2 GTRD no Colon (HCT116) 21839633
chr19 3555316 3558525 TCF7L2 GTRD no Colon (HCT116) 108367830
chr19 3555319 3558510 ZNF274 GTRD no Cervix (HeLa-S3) 21839634
chr19 3555319 3558510 ZNF274 GTRD no Cervix (HeLa-S3) 108367831
chr19 3555352 3556052 ZNF274 GTRD no Blood (GM12878) 108367832
chr19 3555391 3556766 ZNF274 GTRD no Cervix (HeLa-S3) 108367833
chr19 3555402 3558474 POLR2A UCSC Txn Factor no Conserved 108367834
chr19 3555840 3555849 THAP1 JASPAR yes 112139135
chr19 3555842 3555863 ZNF263 JASPAR yes 112139136
chr19 3555843 3555847 LFA1 TRANSFAC yes 112139137
Genes associated with rs572337953[chr19:3555845], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More