EnhancerDB
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  3. rs573089062[chr16:1174434]
Enhancers that have rs573089062[chr16:1174434]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1171945 1177784 enh52190
Muscle (A673) Colon (HCT116) Large Intestine
Transcript factors that have rs573089062[chr16:1174434]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1171353 1175840 TCF7L2 GTRD no Colon (HCT116) 21684242
chr16 1171353 1175840 TCF7L2 GTRD no Colon (HCT116) 108171163
chr16 1173484 1176447 ZBTB33 GTRD no Lung (A549) 108171164
chr16 1173862 1175652 TCF7L2 GTRD no Colon (HCT116) 21684248
chr16 1173862 1175652 TCF7L2 GTRD no Colon (HCT116) 108171165
chr16 1173865 1176188 TCF7L2 GTRD no Colon (HCT116) 21684249
chr16 1173865 1176188 TCF7L2 GTRD no Colon (HCT116) 108171166
chr16 1173873 1177476 TCF7L2 GTRD no Colon (HCT116) 21684250
chr16 1173873 1177476 TCF7L2 GTRD no Colon (HCT116) 108171167
chr16 1173920 1176760 TCF7L2 GTRD no Colon (HCT116) 21684251
chr16 1173920 1176760 TCF7L2 GTRD no Colon (HCT116) 108171168
chr16 1173930 1176526 ZBTB33 GTRD no Lung (A549) 108171169
chr16 1174108 1175585 TCF7L2 GTRD no Colon (HCT116) 21684252
chr16 1174336 1174941 TCF7L2 GTRD no Colon (HCT116) 21684253
chr16 1174428 1174439 NFKB1 JASPAR yes 9137421
chr16 1174428 1174441 NFKB1 JASPAR yes 9137422
chr16 1174428 1174441 NFKB2 JASPAR yes 9137423
chr16 1174429 1174440 NFKB1 JASPAR yes 9137424
chr16 1174430 1174441 NFKB1 JASPAR yes 9137425
chr16 1174430 1174442 ZBTB7B JASPAR yes 9137426
chr16 1174432 1174447 TFAP2A JASPAR yes 9137427
chr16 1174432 1174447 TFAP2C JASPAR yes 9137428
chr16 1174433 1174443 ZNF740 JASPAR yes 9137429
chr16 1174433 1174446 TFAP2B JASPAR yes 9137430
chr16 1174434 1174446 TFAP2A JASPAR yes 9137431
Genes associated with rs573089062[chr16:1174434], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More