EnhancerDB
  1. Home
  2. SNP
  3. rs573558301[chr17:2254190]
Enhancers that have rs573558301[chr17:2254190]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2253665 2259250 enh47991
Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Blood (OCI-LY7) Colon (HCT116) Peripheral Blood (MM.1S) Spleen Thymus Epithelial (MCF-7)
Transcript factors that have rs573558301[chr17:2254190]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2254188 2254198 ALX3 JASPAR yes 52748083
chr17 2254188 2254198 EMX1 JASPAR yes 52748084
chr17 2254188 2254198 EMX2 JASPAR yes 52748085
chr17 2254188 2254198 EVX2 JASPAR yes 52748086
chr17 2254188 2254198 GSX1 JASPAR yes 52748087
chr17 2254188 2254198 GSX2 JASPAR yes 52748088
chr17 2254188 2254198 HOXA2 JASPAR yes 52748089
chr17 2254188 2254198 HOXB2 JASPAR yes 52748090
chr17 2254188 2254198 HOXB3 JASPAR yes 52748091
chr17 2254188 2254198 MEOX1 JASPAR yes 52748092
chr17 2254188 2254198 MEOX2 JASPAR yes 52748093
chr17 2254188 2254198 NOTO JASPAR yes 52748094
chr17 2254189 2254197 DLX6 JASPAR yes 52748095
chr17 2254189 2254197 EN1 JASPAR yes 52748096
chr17 2254189 2254197 LBX1 JASPAR yes 52748097
chr17 2254189 2254197 PAX4 JASPAR yes 52748098
chr17 2254189 2254197 PDX1 JASPAR yes 52748099
chr17 2254189 2254197 VAX1 JASPAR yes 52748100
chr17 2254189 2254197 VAX2 JASPAR yes 52748101
chr17 2254189 2254197 VSX1 JASPAR yes 52748102
chr17 2254189 2254197 VSX2 JASPAR yes 52748103
chr17 2254189 2254202 DUXA JASPAR yes 52748104
chr17 2254190 2254201 NFIL3 JASPAR yes 52748105
chr17 2254190 2254201 PHOX2A JASPAR yes 52748106
chr17 2254190 2254201 PROP1 JASPAR yes 52748107
Genes associated with rs573558301[chr17:2254190], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More