EnhancerDB
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  3. rs573997128[chr2:228606009]
Enhancers that have rs573997128[chr2:228606009]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 228602125 228606275 enh53603
Large Intestine
Transcript factors that have rs573997128[chr2:228606009]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 228605997 228606009 FOXI1 JASPAR yes 81540685
chr2 228605998 228606013 HNF1A JASPAR yes 81540686
chr2 228605999 228606012 HNF1B JASPAR yes 81540687
chr2 228605999 228606015 POU4F3 JASPAR yes 81540688
chr2 228606002 228606012 GSX2 JASPAR yes 81540689
chr2 228606002 228606012 HOXB2 JASPAR yes 81540690
chr2 228606002 228606012 HOXB3 JASPAR yes 81540691
chr2 228606002 228606012 MNX1 JASPAR yes 81540692
chr2 228606002 228606012 POU6F1 JASPAR yes 81540693
chr2 228606002 228606013 HOXA10 JASPAR yes 81540694
chr2 228606003 228606011 LMX1A JASPAR yes 81540695
chr2 228606003 228606011 LMX1B JASPAR yes 81540696
chr2 228606003 228606011 NKX6-1 JASPAR yes 81540697
chr2 228606003 228606011 NKX6-2 JASPAR yes 81540698
chr2 228606003 228606011 VAX1 JASPAR yes 81540699
chr2 228606003 228606011 VAX2 JASPAR yes 81540700
chr2 228606003 228606011 VSX1 JASPAR yes 81540701
chr2 228606003 228606011 VSX2 JASPAR yes 81540702
chr2 228606004 228606025 IRF1 JASPAR yes 81540703
chr2 228606005 228606026 IRF1 JASPAR yes 81540704
chr2 228606006 228606021 FOXP1 JASPAR yes 81540705
chr2 228606008 228606014 TBP TRANSFAC yes 81540706
chr2 228606008 228606023 FOXP1 JASPAR yes 81540707
chr2 228606009 228606030 IRF1 JASPAR yes 81540708
Genes associated with rs573997128[chr2:228606009], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More