EnhancerDB
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  3. rs57503239[chr12:54216549]
Enhancers that have rs57503239[chr12:54216549]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54212382 54224675 enh43743
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs57503239[chr12:54216549]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54214081 54218599 ZNF274 GTRD no Cervix (HeLa-S3) 21549861
chr12 54215599 54217739 ZNF274 GTRD no Cervix (HeLa-S3) 21549924
chr12 54215835 54218451 ZNF143 GTRD no Epithelial (MCF-7) 21549925
chr12 54216202 54218750 ZNF143 GTRD no Epithelial (MCF-7) 21549927
chr12 54216229 54217748 ZNF274 GTRD no Cervix (HeLa-S3) 21549928
chr12 54216241 54218036 ZNF143 GTRD no Epithelial (MCF-7) 21549929
chr12 54216539 54216552 POU3F3 JASPAR yes 121011104
chr12 54216539 54216553 POU1F1 JASPAR yes 121011105
chr12 54216540 54216552 POU3F1 JASPAR yes 121011106
chr12 54216540 54216553 POU3F3 JASPAR yes 121011107
chr12 54216543 54216564 IRF1 JASPAR yes 121011108
chr12 54216549 54216564 FOXP1 JASPAR yes 121011109
chr12 54216549 54216564 MEF2C JASPAR yes 121011110
chr12 54216549 54216570 IRF1 JASPAR yes 121011111
Genes associated with rs57503239[chr12:54216549], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More