EnhancerDB
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  3. rs575429425[chr6:108882113]
Enhancers that have rs575429425[chr6:108882113]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 108877863 108893955 enh9307
Liver (HepG2) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Thymus Heart
Transcript factors that have rs575429425[chr6:108882113]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 108878532 108882425 POLR2A UCSC Txn Factor no Conserved 108541208
chr6 108878532 108882425 POLR2A UCSC Txn Factor no Conserved 108541209
chr6 108882108 108882120 TFAP2A JASPAR yes 104177278
chr6 108882109 108882118 TFAP2A JASPAR yes 104177279
chr6 108882113 108882120 SP1 TRANSFAC yes 104177280
Genes associated with rs575429425[chr6:108882113], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More