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- rs575494678[chr17:39109837]
Enhancers that have rs575494678[chr17:39109837]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
39099743 |
39114455 |
enh17146 |
|
|
Transcript factors that have rs575494678[chr17:39109837]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
39108802
|
39110107
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21757343
|
|
|
chr17
|
39108802
|
39110107
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108258044
|
|
|
chr17
|
39109171
|
39109948
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21757346
|
|
|
chr17
|
39109171
|
39109948
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108258052
|
|
|
chr17
|
39109507
|
39110028
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21757347
|
|
|
chr17
|
39109827
|
39109848
|
IRF1
|
JASPAR
|
yes
|
|
54247492
|
|
|
chr17
|
39109832
|
39109853
|
IRF1
|
JASPAR
|
yes
|
|
54247493
|
|
Genes associated with rs575494678[chr17:39109837], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |