EnhancerDB
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Enhancers that have rs57550006[chr2:38599259]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38595865 38602575 enh5422
Blood (Karpas-422)
chr2 38599092 38599284 vista31114
VISTA
Transcript factors that have rs57550006[chr2:38599259]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38599252 38599264 POU2F1 JASPAR yes 22038224
chr2 38599252 38599264 POU2F1 JASPAR yes 73133189
chr2 38599252 38599265 POU3F3 JASPAR yes 22038225
chr2 38599252 38599265 POU3F3 JASPAR yes 73133190
chr2 38599253 38599265 POU3F1 JASPAR yes 22038226
chr2 38599253 38599265 POU3F2 JASPAR yes 22038227
chr2 38599253 38599265 POU3F1 JASPAR yes 73133191
chr2 38599253 38599265 POU3F2 JASPAR yes 73133192
chr2 38599257 38599267 ESX1 JASPAR yes 22038228
chr2 38599257 38599267 GBX2 JASPAR yes 22038229
chr2 38599257 38599267 RAX JASPAR yes 22038230
chr2 38599257 38599267 ESX1 JASPAR yes 73133193
chr2 38599257 38599267 GBX2 JASPAR yes 73133194
chr2 38599257 38599267 RAX JASPAR yes 73133195
chr2 38599258 38599266 BARX1 JASPAR yes 22038231
chr2 38599258 38599266 BARX1 JASPAR yes 73133196
chr2 38599258 38599267 VENTX JASPAR yes 22038232
chr2 38599258 38599267 VENTX JASPAR yes 73133197
chr2 38599258 38599272 ONECUT3 JASPAR yes 22038233
chr2 38599258 38599272 ONECUT3 JASPAR yes 73133198
chr2 38599259 38599280 IRF1 JASPAR yes 22038234
chr2 38599259 38599280 IRF1 JASPAR yes 73133199
Genes associated with rs57550006[chr2:38599259], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More