EnhancerDB
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  3. rs575523516[chr10:96892552]
Enhancers that have rs575523516[chr10:96892552]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 96888825 96894975 enh13416
Placenta Large Intestine
Transcript factors that have rs575523516[chr10:96892552]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 96892540 96892553 DUXA JASPAR yes 129265955
chr10 96892541 96892552 DUX4 JASPAR yes 129265956
chr10 96892541 96892552 PHOX2A JASPAR yes 129265957
chr10 96892541 96892552 PROP1 JASPAR yes 129265958
chr10 96892544 96892554 ALX3 JASPAR yes 129265959
chr10 96892544 96892554 GSX2 JASPAR yes 129265960
chr10 96892544 96892554 MIXL1 JASPAR yes 129265961
chr10 96892544 96892554 MNX1 JASPAR yes 129265962
chr10 96892545 96892553 ISX JASPAR yes 129265963
chr10 96892545 96892553 LMX1A JASPAR yes 129265964
chr10 96892545 96892553 LMX1B JASPAR yes 129265965
chr10 96892545 96892553 NKX6-1 JASPAR yes 129265966
chr10 96892545 96892553 NKX6-2 JASPAR yes 129265967
chr10 96892545 96892553 PRRX1 JASPAR yes 129265968
chr10 96892545 96892553 RAX2 JASPAR yes 129265969
chr10 96892545 96892553 SHOX JASPAR yes 129265970
chr10 96892545 96892553 UNCX JASPAR yes 129265971
chr10 96892545 96892553 VAX1 JASPAR yes 129265972
chr10 96892546 96892567 IRF1 JASPAR yes 129265973
chr10 96892548 96892569 IRF1 JASPAR yes 129265974
chr10 96892550 96892556 TBP TRANSFAC yes 129265975
chr10 96892552 96892567 PRDM1 JASPAR yes 129265976
chr10 96892552 96892573 IRF1 JASPAR yes 129265977
Genes associated with rs575523516[chr10:96892552], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More