EnhancerDB
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  3. rs575624907[chr1:236110320]
Enhancers that have rs575624907[chr1:236110320]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 236091945 236120510 enh12806
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Placenta Muscle (Myoblast) Breast Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs575624907[chr1:236110320]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 236108551 236110321 ZBTB33 GTRD no Lung (A549) 107886377
chr1 236109080 236110403 ZNF143 GTRD no Epithelial (MCF-7) 107886386
chr1 236109109 236110442 ZNF274 GTRD no Cervix (HeLa-S3) 107886392
chr1 236109120 236110350 ZNF143 GTRD no Epithelial (MCF-7) 107886396
chr1 236109138 236110332 ZNF274 GTRD no Blood (GM12878) 21404051
chr1 236109138 236110332 ZNF274 GTRD no Blood (GM12878) 107886401
chr1 236109174 236110464 ZNF274 GTRD no Blood (GM12878) 21404053
chr1 236109174 236110464 ZNF274 GTRD no Blood (GM12878) 107886410
chr1 236109222 236110467 ZNF274 GTRD no Bone Marrow (K562) 107886422
chr1 236109318 236110944 ZNF143 GTRD no Epithelial (MCF-7) 107886443
chr1 236109690 236110471 ZNF143 GTRD no Epithelial (MCF-7) 107886470
chr1 236110024 236110620 ZNF274 GTRD no Bone Marrow (K562) 107886489
chr1 236110317 236110326 NKX3-2 JASPAR yes 36391559
chr1 236110318 236110326 ISL2 JASPAR yes 36391560
Genes associated with rs575624907[chr1:236110320], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More