EnhancerDB
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  3. rs576565389[chr16:88624509]
Enhancers that have rs576565389[chr16:88624509]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88616565 88627715 enh60638
Bone Marrow (K562) Blood (OCI-LY7) Colon (HCT116) Peripheral Blood (MM.1S) Pancreas Spleen
Transcript factors that have rs576565389[chr16:88624509]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88622016 88626152 TCF7L2 GTRD no Colon (HCT116) 21736748
chr16 88622031 88626093 TCF7L2 GTRD no Colon (HCT116) 21736749
chr16 88622082 88625818 TCF7L2 GTRD no Colon (HCT116) 21736751
chr16 88624011 88625734 TCF7L2 GTRD no Colon (HCT116) 21736763
chr16 88624039 88625665 ZNF274 GTRD no Bone Marrow (K562) 21736764
chr16 88624373 88625003 TCF7L2 GTRD no Colon (HCT116) 21736765
chr16 88624421 88624962 TCF7L2 GTRD no Colon (HCT116) 21736766
chr16 88624496 88624509 TFAP2A JASPAR yes 12295385
chr16 88624496 88624509 TFAP2B JASPAR yes 12295386
chr16 88624496 88624509 TFAP2C JASPAR yes 12295387
chr16 88624496 88624511 TFAP2C JASPAR yes 12295388
chr16 88624496 88625061 TCF7L2 GTRD no Colon (HCT116) 21736767
chr16 88624497 88624510 TFAP2A JASPAR yes 12295389
chr16 88624497 88624510 TFAP2B JASPAR yes 12295390
chr16 88624497 88624510 TFAP2C JASPAR yes 12295391
chr16 88624505 88624509 LFA1 TRANSFAC yes 12295392
chr16 88624509 88624514 SP1 TRANSFAC yes 12295393
Genes associated with rs576565389[chr16:88624509], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More