EnhancerDB
  1. Home
  2. SNP
  3. rs577003249[chr6:42739247]
Enhancers that have rs577003249[chr6:42739247]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42728265 42744755 enh9126
Prostate (PC-3) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Blood (OCI-LY7) Blood (GM12878) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus
chr6 42738530 42739530 vista51993
VISTA
Transcript factors that have rs577003249[chr6:42739247]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42739227 42739247 RREB1 JASPAR yes 70366040
chr6 42739227 42739247 RREB1 JASPAR yes 101740389
chr6 42739229 42739249 RREB1 JASPAR yes 70366041
chr6 42739229 42739249 RREB1 JASPAR yes 101740390
chr6 42739237 42739247 ZNF740 JASPAR yes 70366044
chr6 42739237 42739247 ZNF740 JASPAR yes 101740393
chr6 42739238 42739248 SP1 JASPAR yes 70366045
chr6 42739238 42739248 ZNF740 JASPAR yes 70366046
chr6 42739238 42739248 SP1 JASPAR yes 101740394
chr6 42739238 42739248 ZNF740 JASPAR yes 101740395
chr6 42739245 42739249 H4TF2 TRANSFAC yes 70366047
chr6 42739245 42739249 H4TF2 TRANSFAC yes 101740396
chr6 42739245 42739266 REST JASPAR yes 70366048
chr6 42739245 42739266 REST JASPAR yes 101740397
Genes associated with rs577003249[chr6:42739247], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More