EnhancerDB
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  3. rs577454125[chr2:39957950]
Enhancers that have rs577454125[chr2:39957950]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 39948045 39958487 enh33245
Prostate (PC-3) Brain (SK-N-SH) Astrocyte Heart Epithelial (MCF-7)
Transcript factors that have rs577454125[chr2:39957950]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 39957948 39957958 EMX1 JASPAR yes 73227462
chr2 39957948 39957958 EMX2 JASPAR yes 73227463
chr2 39957948 39957958 EN2 JASPAR yes 73227464
chr2 39957948 39957958 EVX1 JASPAR yes 73227465
chr2 39957948 39957958 EVX2 JASPAR yes 73227466
chr2 39957948 39957958 GBX1 JASPAR yes 73227467
chr2 39957948 39957958 GSX1 JASPAR yes 73227468
chr2 39957948 39957958 HOXA2 JASPAR yes 73227469
chr2 39957948 39957958 HOXB2 JASPAR yes 73227470
chr2 39957948 39957958 LHX2 JASPAR yes 73227471
chr2 39957948 39957958 MEOX1 JASPAR yes 73227472
chr2 39957948 39957958 NOTO JASPAR yes 73227473
chr2 39957949 39957957 DLX6 JASPAR yes 73227474
chr2 39957949 39957957 EN1 JASPAR yes 73227475
chr2 39957949 39957957 LBX1 JASPAR yes 73227476
chr2 39957949 39957957 PAX4 JASPAR yes 73227477
chr2 39957949 39957957 PDX1 JASPAR yes 73227478
chr2 39957949 39957957 VAX1 JASPAR yes 73227479
chr2 39957949 39957957 VAX2 JASPAR yes 73227480
chr2 39957949 39957957 VSX1 JASPAR yes 73227481
chr2 39957949 39957957 VSX2 JASPAR yes 73227482
chr2 39957949 39957959 POU6F2 JASPAR yes 73227483
Genes associated with rs577454125[chr2:39957950], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More