EnhancerDB
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  3. rs5778882[chr1:175934721]
Enhancers that have rs5778882[chr1:175934721]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 175929365 175935735 enh749
Brain (SK-N-MC) Blood (Karpas-422)
Transcript factors that have rs5778882[chr1:175934721]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 175934702 175934722 RREB1 JASPAR yes 33310520
chr1 175934702 175934723 IRF1 JASPAR yes 33310521
chr1 175934703 175934724 IRF1 JASPAR yes 33310522
chr1 175934707 175934727 RREB1 JASPAR yes 33310524
chr1 175934708 175934729 IRF1 JASPAR yes 33310525
chr1 175934709 175934724 FOXP1 JASPAR yes 33310527
chr1 175934710 175934725 STAT2 JASPAR yes 33310528
chr1 175934712 175934724 IRF1 JASPAR yes 33310529
chr1 175934712 175934726 IRF7 JASPAR yes 33310530
chr1 175934712 175934727 IRF9 JASPAR yes 33310531
chr1 175934712 175934732 RREB1 JASPAR yes 33310532
chr1 175934713 175934733 RREB1 JASPAR yes 33310533
chr1 175934713 175934734 IRF1 JASPAR yes 33310534
chr1 175934714 175934729 FOXP1 JASPAR yes 33310536
chr1 175934716 175934736 RREB1 JASPAR yes 33310537
chr1 175934717 175934737 RREB1 JASPAR yes 33310538
chr1 175934720 175934726 TCF4 TRANSFAC yes 33310539
chr1 175934720 175934732 FOXI1 JASPAR yes 33310540
chr1 175934720 175934735 FOXP1 JASPAR yes 33310541
chr1 175934720 175934740 RREB1 JASPAR yes 33310542
chr1 175934721 175934741 RREB1 JASPAR yes 33310543
Genes associated with rs5778882[chr1:175934721], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More