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- rs5780016[chr1:200232668]
Enhancers that have rs5780016[chr1:200232668]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
200228205 |
200234575 |
enh92140 |
|
|
Transcript factors that have rs5780016[chr1:200232668]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
200232259
|
200232875
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
21362659
|
|
|
chr1
|
200232340
|
200232676
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
21362661
|
|
|
chr1
|
200232355
|
200232695
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
21362663
|
|
|
chr1
|
200232412
|
200232792
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
21362664
|
|
|
chr1
|
200232451
|
200232741
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
21362666
|
|
|
chr1
|
200232656
|
200232677
|
IRF1
|
JASPAR
|
yes
|
|
34426295
|
|
|
chr1
|
200232662
|
200232677
|
FOXP1
|
JASPAR
|
yes
|
|
34426296
|
|
Genes associated with rs5780016[chr1:200232668], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |