EnhancerDB
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  3. rs578022568[chr19:10517027]
Enhancers that have rs578022568[chr19:10517027]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10515565 10521735 enh48167
Blood (T-cell) Thymus Blood (OCI-LY7)
Transcript factors that have rs578022568[chr19:10517027]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10516715 10518445 ZBTB33 GTRD no Lung (A549) 108383230
chr19 10516757 10518608 ZNF274 GTRD no Bone Marrow (K562) 108383231
chr19 10516794 10518242 ZBTB33 GTRD no Lung (A549) 108383232
chr19 10516854 10517938 ZBTB33 GTRD no Lung (A549) 108383233
chr19 10516862 10518347 TCF7L2 GTRD no Colon (HCT116) 108383234
chr19 10516870 10518217 ZNF143 GTRD no Epithelial (MCF-7) 108383235
chr19 10516874 10518225 ZNF143 GTRD no Epithelial (MCF-7) 108383236
chr19 10516878 10519295 TCF7L2 GTRD no Colon (HCT116) 108383237
chr19 10516889 10519460 TCF7L2 GTRD no Colon (HCT116) 108383238
chr19 10516907 10518296 TCF7L2 GTRD no Colon (HCT116) 108383239
chr19 10516911 10519269 TCF7L2 GTRD no Colon (HCT116) 108383240
chr19 10516930 10518073 ZNF143 GTRD no Epithelial (MCF-7) 108383241
chr19 10516952 10518254 TCF7L2 GTRD no Colon (HCT116) 108383242
chr19 10516957 10517811 ZBTB33 GTRD no Lung (A549) 108383243
chr19 10516972 10519107 TCF7L2 GTRD no Colon (HCT116) 108383244
chr19 10516992 10518220 TCF7L2 GTRD no Colon (HCT116) 108383245
chr19 10517010 10519158 ZNF274 GTRD no Bone Marrow (K562) 108383246
chr19 10517017 10517034 RXRA JASPAR yes 112419801
Genes associated with rs578022568[chr19:10517027], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More