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- rs5780539[chr1:209997123]
Enhancers that have rs5780539[chr1:209997123]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
209996933 |
209997272 |
vista4933 |
|
|
Transcript factors that have rs5780539[chr1:209997123]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
209996483
|
209997306
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107866636
|
|
|
chr1
|
209996531
|
209997281
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107866637
|
|
|
chr1
|
209996561
|
209997274
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107866639
|
|
|
chr1
|
209996596
|
209997161
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107866640
|
|
|
chr1
|
209996660
|
209997208
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107866641
|
|
|
chr1
|
209996751
|
209997163
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107866643
|
|
|
chr1
|
209996827
|
209997218
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107866645
|
|
|
chr1
|
209996874
|
209997138
|
FOS
|
UCSC Txn Factor
|
no
|
Conserved
|
107866646
|
|
|
chr1
|
209996894
|
209997300
|
GATA2
|
UCSC Txn Factor
|
no
|
Conserved
|
107866647
|
|
|
chr1
|
209996948
|
209997133
|
JUN
|
UCSC Txn Factor
|
no
|
Conserved
|
107866648
|
|
|
chr1
|
209996981
|
209997360
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107866649
|
|
|
chr1
|
209997018
|
209997344
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107866650
|
|
|
chr1
|
209997024
|
209997367
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107866651
|
|
|
chr1
|
209997120
|
209997135
|
SOX21
|
JASPAR
|
yes
|
|
118450136
|
|
Genes associated with rs5780539[chr1:209997123], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |