-
Home
- SNP
- rs578198966[chr15:70006508]
Enhancers that have rs578198966[chr15:70006508]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr15 |
70003425 |
70009290 |
enh47886 |
|
|
Transcript factors that have rs578198966[chr15:70006508]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr15
|
70006197
|
70006808
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108151716
|
|
|
chr15
|
70006362
|
70007046
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108151717
|
|
|
chr15
|
70006444
|
70006880
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108151718
|
|
|
chr15
|
70006474
|
70006884
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108151719
|
|
|
chr15
|
70006497
|
70006512
|
NR2C2
|
JASPAR
|
yes
|
|
24372304
|
|
|
chr15
|
70006502
|
70006826
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108151720
|
|
|
chr15
|
70006503
|
70006516
|
NR2F1
|
JASPAR
|
yes
|
|
24372306
|
|
|
chr15
|
70006504
|
70006519
|
LEF1
|
JASPAR
|
yes
|
|
24372307
|
|
|
chr15
|
70006504
|
70006519
|
NR2C2
|
JASPAR
|
yes
|
|
24372308
|
|
|
chr15
|
70006505
|
70006513
|
NR4A2
|
JASPAR
|
yes
|
|
24372309
|
|
|
chr15
|
70006507
|
70006511
|
ESR1
|
TRANSFAC
|
yes
|
|
24372310
|
|
|
chr15
|
70006508
|
70006888
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108151721
|
|
Genes associated with rs578198966[chr15:70006508], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |