EnhancerDB
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  3. rs578250793[chr17:38228608]
Enhancers that have rs578250793[chr17:38228608]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38219066 38232975 enh17137
Bone Marrow (K562) Cervix (HeLa-S3) Bone (Osteoblast) Muscle (A673) Placenta Pancreas Blood (T-cell) Heart
chr17 38224836 38229126 vista690
VISTA
Transcript factors that have rs578250793[chr17:38228608]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38228409 38229521 POLR2A UCSC Txn Factor no Conserved 107687984
chr17 38228409 38229521 POLR2A UCSC Txn Factor no Conserved 108253932
chr17 38228431 38228950 TFAP2C UCSC Txn Factor no Conserved 107687985
chr17 38228473 38228923 TFAP2A UCSC Txn Factor no Conserved 107687986
chr17 38228589 38228811 FOXA1 UCSC Txn Factor no Conserved 107687987
chr17 38228595 38228970 NR3C1 UCSC Txn Factor no Conserved 107687988
chr17 38228604 38228613 TFAP2A JASPAR yes 12705
chr17 38228604 38228613 TFAP2A JASPAR yes 54191508
chr17 38228607 38228620 NFKB1 JASPAR yes 12706
chr17 38228607 38228620 NFKB2 JASPAR yes 12707
chr17 38228607 38228620 NFKB1 JASPAR yes 54191509
chr17 38228607 38228620 NFKB2 JASPAR yes 54191510
chr17 38228608 38228618 NFKB1 JASPAR yes 12708
chr17 38228608 38228618 NFKB1 JASPAR yes 54191511
chr17 38228608 38228619 NFKB1 JASPAR yes 12709
chr17 38228608 38228619 NFKB1 JASPAR yes 54191512
Genes associated with rs578250793[chr17:38228608], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More