EnhancerDB
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  3. rs5825240[chr18:55484425]
Enhancers that have rs5825240[chr18:55484425]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55476845 55489580 enh17732
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Lung (PC-9) Bone (Osteoblast) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Spleen Epithelial (MCF-7)
Transcript factors that have rs5825240[chr18:55484425]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55484409 55484425 POU4F2 JASPAR yes 110889343
chr18 55484409 55484425 POU4F3 JASPAR yes 110889344
chr18 55484413 55484426 DUXA JASPAR yes 110889367
chr18 55484414 55484425 DUX4 JASPAR yes 110889370
chr18 55484414 55484425 PHOX2A JASPAR yes 110889371
chr18 55484414 55484425 PROP1 JASPAR yes 110889372
chr18 55484423 55484429 TBP TRANSFAC yes 110889373
Genes associated with rs5825240[chr18:55484425], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More