-
Home
- SNP
- rs583171[chr1:55400628]
Enhancers that have rs583171[chr1:55400628]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
55397805 |
55407955 |
enh11877 |
|
|
Transcript factors that have rs583171[chr1:55400628]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
55400241
|
55400932
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107805379
|
|
|
chr1
|
55400274
|
55401125
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107805380
|
|
|
chr1
|
55400486
|
55400930
|
TAF1
|
ENCODE Uniform TFBS
|
no
|
Brain (SK-N-SH)
|
107805381
|
|
|
chr1
|
55400583
|
55400995
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107805382
|
|
|
chr1
|
55400592
|
55400935
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107805383
|
|
|
chr1
|
55400616
|
55400630
|
BATF3
|
JASPAR
|
yes
|
|
29007376
|
|
Genes associated with rs583171[chr1:55400628], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |