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- rs58342790[chr19:1016285]
Enhancers that have rs58342790[chr19:1016285]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
1015145 |
1019295 |
enh4949 |
|
|
Transcript factors that have rs58342790[chr19:1016285]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
1014726
|
1018559
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108349503
|
|
|
chr19
|
1015120
|
1018806
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108349504
|
|
|
chr19
|
1015674
|
1017998
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108349505
|
|
|
chr19
|
1015932
|
1018374
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108349506
|
|
|
chr19
|
1016096
|
1018140
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108349507
|
|
|
chr19
|
1016133
|
1018831
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108349508
|
|
|
chr19
|
1016158
|
1017388
|
AR
|
GTRD
|
no
|
Prostate (PC-3)
|
108349509
|
|
|
chr19
|
1016179
|
1018500
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108349510
|
|
|
chr19
|
1016212
|
1018829
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108349511
|
|
|
chr19
|
1016230
|
1018035
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108349512
|
|
|
chr19
|
1016237
|
1018734
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108349513
|
|
|
chr19
|
1016257
|
1017737
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108349514
|
|
|
chr19
|
1016259
|
1017968
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108349515
|
|
|
chr19
|
1016264
|
1016285
|
ZNF263
|
JASPAR
|
yes
|
|
111989110
|
|
|
chr19
|
1016271
|
1016285
|
PLAG1
|
JASPAR
|
yes
|
|
111989112
|
|
|
chr19
|
1016273
|
1018736
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108349516
|
|
|
chr19
|
1016278
|
1017261
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108349517
|
|
|
chr19
|
1016280
|
1016293
|
NFKB1
|
JASPAR
|
yes
|
|
111989114
|
|
|
chr19
|
1016280
|
1016293
|
NFKB2
|
JASPAR
|
yes
|
|
111989115
|
|
|
chr19
|
1016281
|
1016292
|
NFKB1
|
JASPAR
|
yes
|
|
111989116
|
|
|
chr19
|
1016282
|
1016286
|
LFA1
|
TRANSFAC
|
yes
|
|
111989117
|
|
|
chr19
|
1016282
|
1016292
|
NFKB1
|
JASPAR
|
yes
|
|
111989118
|
|
Genes associated with rs58342790[chr19:1016285], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr19
|
1009647
|
1021117
|
-
|
TMEM259
|
ENSG00000182087.8
|
1021117
|
0
|
Pancreas
|
0.116113
|
16729
|
|