EnhancerDB
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  3. rs58543893[chr1:116828239]
Enhancers that have rs58543893[chr1:116828239]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116827040 116837335 enh579
Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Blood (GM12878) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs58543893[chr1:116828239]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116824595 116828518 ZNF274 GTRD no Blood (GM12878) 21331801
chr1 116825074 116828462 ZNF274 GTRD no Blood (GM12878) 21331802
chr1 116825353 116828529 ZNF274 GTRD no Blood (GM12878) 21331803
chr1 116825460 116828331 ZNF274 GTRD no Blood (GM12878) 21331804
chr1 116825818 116828623 ZNF274 GTRD no Blood (GM12878) 21331805
chr1 116826125 116828450 ZNF274 GTRD no Blood (GM12878) 21331807
chr1 116826220 116828573 ZNF274 GTRD no Blood (GM12878) 21331808
chr1 116827097 116828247 ZNF274 GTRD no Blood (GM12878) 21331839
chr1 116828232 116828242 SP1 JASPAR yes 31789500
chr1 116828232 116828253 ZNF263 JASPAR yes 31789501
chr1 116828234 116828239 SP1 TRANSFAC yes 31789502
Genes associated with rs58543893[chr1:116828239], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More