EnhancerDB
  1. Home
  2. SNP
  3. rs5875553[chr6:36633706]
Enhancers that have rs5875553[chr6:36633706]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 36614945 36639164 enh9086
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs5875553[chr6:36633706]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 36633699 36633710 CDX2 JASPAR yes 101356528
chr6 36633700 36633711 HOXA10 JASPAR yes 101356529
chr6 36633701 36633710 CDX1 JASPAR yes 101356533
chr6 36633701 36633711 HOXA13 JASPAR yes 101356534
chr6 36633701 36633711 HOXB13 JASPAR yes 101356535
chr6 36633701 36633711 HOXD13 JASPAR yes 101356536
chr6 36633701 36633716 FOXP1 JASPAR yes 101356537
chr6 36633702 36633717 FOXP1 JASPAR yes 101356538
chr6 36633703 36633718 FOXP1 JASPAR yes 101356539
chr6 36633704 36633719 FOXP1 JASPAR yes 101356540
chr6 36633704 36633725 IRF1 JASPAR yes 101356541
chr6 36633705 36633711 TBP TRANSFAC yes 101356542
chr6 36633705 36633720 FOXP1 JASPAR yes 101356543
Genes associated with rs5875553[chr6:36633706], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More