EnhancerDB
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Enhancers that have rs61401568[chr1:228338689]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228338559 228344815 enh47303
Bone (Osteoblast) Thymus
Transcript factors that have rs61401568[chr1:228338689]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228337672 228339448 ZNF143 GTRD no Epithelial (MCF-7) 107876920
chr1 228337692 228338990 TCF7L2 GTRD no Colon (HCT116) 107876921
chr1 228337717 228339172 TCF7L2 GTRD no Colon (HCT116) 107876922
chr1 228338271 228339252 ZNF274 GTRD no Bone Marrow (K562) 107876926
chr1 228338290 228339791 ZNF274 GTRD no Bone Marrow (K562) 107876927
chr1 228338299 228339456 ZNF143 GTRD no Epithelial (MCF-7) 107876928
chr1 228338300 228339376 ZNF274 GTRD no Bone Marrow (K562) 107876929
chr1 228338302 228338741 ZNF274 GTRD no Bone Marrow (K562) 107876930
chr1 228338353 228339004 ZNF274 GTRD no Bone Marrow (K562) 107876931
chr1 228338354 228338870 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107876932
chr1 228338372 228340345 ZNF274 GTRD no Bone Marrow (K562) 107876933
chr1 228338392 228339472 ZNF274 GTRD no Bone Marrow (K562) 107876934
chr1 228338396 228339101 ZNF274 GTRD no Bone Marrow (K562) 107876935
chr1 228338397 228339057 TCF7L2 GTRD no Colon (HCT116) 107876936
chr1 228338399 228338929 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107876937
chr1 228338419 228339005 ZNF274 GTRD no Bone Marrow (K562) 107876938
chr1 228338419 228339070 ZNF274 GTRD no Bone Marrow (K562) 107876939
chr1 228338673 228338694 REST JASPAR yes 35903456
Genes associated with rs61401568[chr1:228338689], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More