EnhancerDB
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  3. rs62028318[chr16:27179606]
Enhancers that have rs62028318[chr16:27179606]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 27178861 27194637 enh31749
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Astrocyte Blood (OCI-LY7) Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Spleen Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs62028318[chr16:27179606]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 27179030 27180256 ZNF274 GTRD no Cervix (HeLa-S3) 21700453
chr16 27179071 27180223 ZNF143 GTRD no Epithelial (MCF-7) 21700454
chr16 27179091 27179969 ZNF143 GTRD no Epithelial (MCF-7) 21700455
chr16 27179093 27180120 ZNF143 GTRD no Epithelial (MCF-7) 21700456
chr16 27179106 27180001 ZNF143 GTRD no Epithelial (MCF-7) 21700457
chr16 27179112 27180128 ZNF143 GTRD no Epithelial (MCF-7) 21700458
chr16 27179117 27180047 ZNF143 GTRD no Epithelial (MCF-7) 21700459
chr16 27179117 27180231 ZNF274 GTRD no Cervix (HeLa-S3) 21700460
chr16 27179123 27179857 ZNF143 GTRD no Epithelial (MCF-7) 21700461
chr16 27179124 27180040 ZNF143 GTRD no Epithelial (MCF-7) 21700462
chr16 27179128 27180138 ZNF143 GTRD no Epithelial (MCF-7) 21700463
chr16 27179150 27180076 ZNF274 GTRD no Cervix (HeLa-S3) 21700464
chr16 27179197 27180133 TCF7L2 GTRD no Colon (HCT116) 21700465
chr16 27179214 27179896 TCF7L2 GTRD no Colon (HCT116) 21700466
chr16 27179308 27179840 TCF7L2 GTRD no Colon (HCT116) 21700467
chr16 27179339 27179928 CTCF GTRD no Spleen 21700468
chr16 27179347 27180031 ZNF143 GTRD no Epithelial (MCF-7) 21700469
chr16 27179351 27179918 ZNF143 GTRD no Epithelial (MCF-7) 21700470
chr16 27179375 27180008 ZNF274 GTRD no Cervix (HeLa-S3) 21700471
chr16 27179378 27179976 ZNF143 GTRD no Epithelial (MCF-7) 21700472
chr16 27179483 27179852 TCF7L2 GTRD no Colon (HCT116) 21700473
chr16 27179512 27179906 ZNF274 GTRD no Cervix (HeLa-S3) 21700474
chr16 27179552 27179892 TCF7L2 GTRD no Colon (HCT116) 21700475
chr16 27179593 27179831 ZNF143 GTRD no Epithelial (MCF-7) 21700476
chr16 27179601 27179622 ZNF263 JASPAR yes 10173924
Genes associated with rs62028318[chr16:27179606], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More