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- rs62028355[chr16:27242100]
Enhancers that have rs62028355[chr16:27242100]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
27242037 |
27242327 |
vista22254 |
|
|
Transcript factors that have rs62028355[chr16:27242100]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
27241903
|
27242283
|
CTCF
|
UCSC Txn Factor
|
no
|
Conserved
|
108189967
|
|
|
chr16
|
27241914
|
27242570
|
E2F1
|
UCSC Txn Factor
|
no
|
Conserved
|
108189968
|
|
|
chr16
|
27241914
|
27242570
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
108189969
|
|
|
chr16
|
27241951
|
27243799
|
AR
|
GTRD
|
no
|
Prostate (PC-3)
|
108189970
|
|
|
chr16
|
27241964
|
27242194
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108189971
|
|
|
chr16
|
27241978
|
27242194
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
108189972
|
|
|
chr16
|
27241978
|
27242195
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
108189973
|
|
|
chr16
|
27241984
|
27242208
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108189974
|
|
|
chr16
|
27242095
|
27242106
|
SPDEF
|
JASPAR
|
yes
|
|
49360137
|
|
Genes associated with rs62028355[chr16:27242100], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |